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SLITRK6 SLIT and NTRK like family member 6 [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104623949, updated on 12-Mar-2024

Summary

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Gene symbol
SLITRK6
Gene description
SLIT and NTRK like family member 6
Locus tag
N335_05113
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes; Phaethontidae; Phaethon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010552372.1 (39982..46763, complement)

NW_010552372.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010552372.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of presynapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SLIT and NTRK-like protein 6
Names
SLIT and NTRK-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010552372.1 Reference ASM68728v1

    Range
    39982..46763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010291181.1 → XP_010289483.1  SLIT and NTRK-like protein 6

    UniProtKB/TrEMBL
    A0A091TNK5
    Conserved Domains (5) summary
    sd00031
    Location:210 → 222
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:92 → 113
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:387 → 426
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:410 → 470
    LRR_8; Leucine rich repeat
    cl15307
    Location:516 → 566
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
Heading Accession and Version

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