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USP44 ubiquitin specific peptidase 44 [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104619111, updated on 12-Mar-2024

Summary

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Gene symbol
USP44
Gene description
ubiquitin specific peptidase 44
Locus tag
N335_13788
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes; Phaethontidae; Phaethon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010532609.1 (26068..42600, complement)

NW_010532609.1Genomic Context describing neighboring genes Neighboring gene methionyl aminopeptidase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010532609.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 44
Names
Ubiquitin carboxyl-terminal hydrolase 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010532609.1 Reference ASM68728v1

    Range
    26068..42600 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010284886.1 → XP_010283188.1  ubiquitin carboxyl-terminal hydrolase 44

    UniProtKB/TrEMBL
    A0A091TEE8
    Conserved Domains (3) summary
    cl02553
    Location:268 → 673
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:266 → 673
    UCH; Ubiquitin carboxyl-terminal hydrolase
    pfam02148
    Location:26 → 88
    zf-UBP; Zn-finger in ubiquitin-hydrolases and other protein
Nucleotide Protein
Heading Accession and Version

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