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SPON1 spondin 1 [ Phaethon lepturus (White-tailed tropicbird) ]

Gene ID: 104618730, updated on 12-Mar-2024

Summary

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Gene symbol
SPON1
Gene description
spondin 1
Locus tag
N335_14244
Gene type
protein coding
RefSeq status
MODEL
Organism
Phaethon lepturus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Phaethontiformes; Phaethontidae; Phaethon
Also known as
Spondin-1
Orthologs
human mouse all
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Genomic context

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See SPON1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM68728v1 (GCF_000687285.1) Unplaced Scaffold NW_010530995.1 (53485..89170)

NW_010530995.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010530995.1 Unplaced Scaffold Reference ASM68728v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spondin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phaethon lepturus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM68728v1

Genomic

  1. NW_010530995.1 Reference ASM68728v1

    Range
    53485..89170
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010284404.1 → XP_010282706.1  spondin-1

    UniProtKB/TrEMBL
    A0A091TDQ1
    Conserved Domains (2) summary
    pfam00090
    Location:449 → 496
    TSP_1; Thrombospondin type 1 domain
    pfam06468
    Location:94 → 223
    Spond_N; Spondin_N
Nucleotide Protein
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Gene LinkOut

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