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ATP2B4 ATPase plasma membrane Ca2+ transporting 4 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104576906, updated on 12-Mar-2024

Summary

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Gene symbol
ATP2B4
Gene description
ATPase plasma membrane Ca2+ transporting 4
Locus tag
N309_14927
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010588519.1 (46044..68280, complement)

NW_010588519.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 11A Neighboring gene uncharacterized LOC104576907 Neighboring gene opticin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010588519.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables P-type calcium transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytosolic calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plasma membrane calcium-transporting ATPase 4
Names
Plasma membrane calcium-transporting ATPase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010588519.1 Reference ASM70537v2

    Range
    46044..68280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010224313.1 → XP_010222615.1  plasma membrane calcium-transporting ATPase 4 isoform X1

    See identical proteins and their annotated locations for XP_010222615.1

    UniProtKB/TrEMBL
    A0A099ZRW7
    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1054
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:154 → 455
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:870 → 1048
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:48 → 112
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1093 → 1140
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:657 → 796
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:516 → 605
    Cation_ATPase; Cation transport ATPase (P-type)

  2. XM_010224314.1 → XP_010222616.1  plasma membrane calcium-transporting ATPase 4 isoform X2

    Conserved Domains (7) summary
    TIGR01517
    Location:12 → 1054
    ATPase-IIB_Ca; plasma-membrane calcium-translocating P-type ATPase
    pfam00122
    Location:154 → 455
    E1-E2_ATPase; E1-E2 ATPase
    pfam00689
    Location:870 → 1048
    Cation_ATPase_C; Cation transporting ATPase, C-terminus
    pfam00690
    Location:48 → 112
    Cation_ATPase_N; Cation transporter/ATPase, N-terminus
    pfam12424
    Location:1093 → 1146
    ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
    pfam12710
    Location:657 → 796
    HAD; haloacid dehalogenase-like hydrolase
    pfam13246
    Location:516 → 605
    Cation_ATPase; Cation transport ATPase (P-type)
Nucleotide Protein
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