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PALS2 protein associated with LIN7 2, MAGUK p55 family member [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104574809, updated on 12-Mar-2024

Summary

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Gene symbol
PALS2
Gene description
protein associated with LIN7 2, MAGUK p55 family member
Locus tag
N309_08592
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Also known as
MPP6
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010586755.1 (376894..393669)

NW_010586755.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 31 Neighboring gene neuropeptide Y Neighboring gene gasdermin E Neighboring gene oxysterol binding protein like 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010586755.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAGUK p55 subfamily member 6
Names
membrane palmitoylated protein 6
protein associated with LIN7 2, MAGUK family member

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010586755.1 Reference ASM70537v2

    Range
    376894..393669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010222116.1 → XP_010220418.1  MAGUK p55 subfamily member 6

    UniProtKB/TrEMBL
    A0A099ZKL7
    Conserved Domains (5) summary
    cd12038
    Location:219 → 279
    SH3_MPP6; Src Homology 3 domain of Membrane Protein, Palmitoylated 6 (or MAGUK p55 subfamily member 6)
    smart00072
    Location:347 → 525
    GuKc; Guanylate kinase homologues
    cd00992
    Location:133 → 206
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam00625
    Location:337 → 525
    Guanylate_kin; Guanylate kinase
    pfam02828
    Location:57 → 108
    L27; L27 domain
Nucleotide Protein
Heading Accession and Version

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