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ZNF148 zinc finger protein 148 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104571263, updated on 12-Mar-2024

Summary

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Gene symbol
ZNF148
Gene description
zinc finger protein 148
Locus tag
N309_05993
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010584044.1 (130338..144757, complement)

NW_010584044.1Genomic Context describing neighboring genes Neighboring gene heart development protein with EGF like domains 1 Neighboring gene solute carrier family 12 member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010584044.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 148

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010584044.1 Reference ASM70537v2

    Range
    130338..144757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010218352.1 → XP_010216654.1  zinc finger protein 148 isoform X3

    Conserved Domains (4) summary
    COG5048
    Location:182 → 380
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:130 → 150
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:128 → 150
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:171 → 195
    zf-H2C2_2; Zinc-finger double domain

  2. XM_010218351.1 → XP_010216653.1  zinc finger protein 148 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:196 → 394
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:172 → 192
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:170 → 192
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:212 → 237
    zf-H2C2_2; Zinc-finger double domain

  3. XM_010218350.1 → XP_010216652.1  zinc finger protein 148 isoform X1

    See identical proteins and their annotated locations for XP_010216652.1

    UniProtKB/TrEMBL
    A0A099ZDG2
    Conserved Domains (4) summary
    COG5048
    Location:224 → 422
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:172 → 192
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:170 → 192
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:213 → 237
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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