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ARHGEF16 Rho guanine nucleotide exchange factor 16 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104569465, updated on 12-Mar-2024

Summary

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Gene symbol
ARHGEF16
Gene description
Rho guanine nucleotide exchange factor 16
Locus tag
N309_07510
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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See ARHGEF16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010582699.1 (316159..327886)

NW_010582699.1Genomic Context describing neighboring genes Neighboring gene actin-85C-like Neighboring gene PR/SET domain 16 Neighboring gene multiple EGF like domains 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010582699.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010582699.1 Reference ASM70537v2

    Range
    316159..327886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010216431.1 → XP_010214733.1  rho guanine nucleotide exchange factor 16

    UniProtKB/TrEMBL
    A0A099ZBW3
    Conserved Domains (5) summary
    cd11938
    Location:421 → 473
    SH3_ARHGEF16_26; Src homology 3 domain of the Rho guanine nucleotide exchange factors ARHGEF16 and ARHGEF26
    cd01221
    Location:269 → 410
    PH_ephexin; Ephexin Pleckstrin homology (PH) domain
    pfam00169
    Location:282 → 403
    PH; PH domain
    pfam00621
    Location:68 → 247
    RhoGEF; RhoGEF domain
    cl00388
    Location:13 → 64
    Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
Nucleotide Protein
Heading Accession and Version

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