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DIDO1 death inducer-obliterator 1 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104566087, updated on 12-Mar-2024

Summary

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Gene symbol
DIDO1
Gene description
death inducer-obliterator 1
Locus tag
N309_00338
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010580226.1 (301435..336111)

NW_010580226.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 9 Neighboring gene GID complex subunit 8 homolog Neighboring gene transcription factor like 5 Neighboring gene collagen type IX alpha 3 chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010580226.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
death-inducer obliterator 1
Names
Death-inducer obliterator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010580226.1 Reference ASM70537v2

    Range
    301435..336111
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010212833.1 → XP_010211135.1  death-inducer obliterator 1 isoform X1

    UniProtKB/TrEMBL
    A0A099Z5G7
    Conserved Domains (7) summary
    smart00510
    Location:762 → 863
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    COG5034
    Location:238 → 390
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    TIGR01385
    Location:626 → 867
    TFSII; transcription elongation factor S-II
    cd15639
    Location:354 → 407
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1150 → 1256
    SPOC; SPOC domain
    pfam12871
    Location:2226 → 2309
    PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term
    cl21589
    Location:2061 → 2273
    Relaxase; Relaxase/Mobilization nuclease domain

  2. XM_010212834.1 → XP_010211136.1  death-inducer obliterator 1 isoform X2

    UniProtKB/TrEMBL
    A0A099Z5G7
    Conserved Domains (7) summary
    smart00510
    Location:719 → 820
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    COG5034
    Location:195 → 347
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    TIGR01385
    Location:583 → 824
    TFSII; transcription elongation factor S-II
    cd15639
    Location:311 → 364
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam07744
    Location:1107 → 1213
    SPOC; SPOC domain
    pfam12871
    Location:2183 → 2266
    PRP38_assoc; Pre-mRNA-splicing factor 38-associated hydrophilic C-term
    cl21589
    Location:2018 → 2230
    Relaxase; Relaxase/Mobilization nuclease domain
Nucleotide Protein
Heading Accession and Version

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