U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FDFT1 farnesyl-diphosphate farnesyltransferase 1 [ Tinamus guttatus (white-throated tinamou) ]

Gene ID: 104565951, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
FDFT1
Gene description
farnesyl-diphosphate farnesyltransferase 1
Locus tag
N309_11865
Gene type
protein coding
RefSeq status
MODEL
Organism
Tinamus guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Tinamus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FDFT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM70537v2 (GCF_000705375.1) Unplaced Scaffold NW_010580089.1 (15776..22591)

NW_010580089.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104565952 Neighboring gene nei like DNA glycosylase 2 Neighboring gene cathepsin B Neighboring gene uncharacterized LOC104565955 Neighboring gene uncharacterized LOC104565954

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010580089.1 Unplaced Scaffold Reference ASM70537v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables farnesyl-diphosphate farnesyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables squalene synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in farnesyl diphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
squalene synthase
Names
Squalene synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Tinamus guttatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70537v2

Genomic

  1. NW_010580089.1 Reference ASM70537v2

    Range
    15776..22591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010212698.1 → XP_010211000.1  squalene synthase

    UniProtKB/TrEMBL
    A0A099Z575
    Conserved Domains (1) summary
    cl00210
    Location:1 → 283
    Isoprenoid_Biosyn_C1; Isoprenoid Biosynthesis enzymes, Class 1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.