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PACSIN3 protein kinase C and casein kinase substrate in neurons 3 [ Colius striatus (speckled mousebird) ]

Gene ID: 104553128, updated on 12-Mar-2024

Summary

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Gene symbol
PACSIN3
Gene description
protein kinase C and casein kinase substrate in neurons 3
Locus tag
N325_08382
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 6 NC_084764.1 (5924345..5946028, complement)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010672239.1 (9989..16084, complement)

Chromosome 6 - NC_084764.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 4 Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene ADP ribosylation factor GTPase activating protein 2 Neighboring gene damage specific DNA binding protein 2 Neighboring gene acid phosphatase 2, lysosomal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C and casein kinase substrate in neurons protein 3
Names
Protein kinase C and casein kinase substrate in neurons protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084764.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    5924345..5946028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061997762.1 → XP_061853746.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X5

  2. XM_061997756.1 → XP_061853740.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

  3. XM_061997758.1 → XP_061853742.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X2

  4. XM_061997754.1 → XP_061853738.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

  5. XM_061997761.1 → XP_061853745.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X4

  6. XM_061997760.1 → XP_061853744.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X3

  7. XM_061997755.1 → XP_061853739.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

  8. XM_061997757.1 → XP_061853741.1  protein kinase C and casein kinase substrate in neurons protein 3 isoform X1

Nucleotide Protein
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