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PDSS1 decaprenyl diphosphate synthase subunit 1 [ Colius striatus (speckled mousebird) ]

Gene ID: 104552898, updated on 12-Mar-2024

Summary

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Gene symbol
PDSS1
Gene description
decaprenyl diphosphate synthase subunit 1
Locus tag
N325_05770
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius
Orthologs
human mouse all
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Genomic context

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See PDSS1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_12 current bColStr4.1.hap1 (GCF_028858725.1) 5 NC_084763.1 (50609500..50632689, complement)
100 previous assembly ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010671295.1 (48981..70122, complement)

Chromosome 5 - NC_084763.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 5 Neighboring gene abl interactor 1 Neighboring gene protein adenylyltransferase SelO Neighboring gene amyloid beta precursor protein binding family B member 1 interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables prenyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoprenoid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
all trans-polyprenyl-diphosphate synthase PDSS1
Names
prenyl (decaprenyl) diphosphate synthase, subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858725.1-RS_2023_12

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bColStr4.1.hap1 Primary Assembly

Genomic

  1. NC_084763.1 Reference bColStr4.1.hap1 Primary Assembly

    Range
    50609500..50632689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_061996644.1 → XP_061852628.1  all trans-polyprenyl-diphosphate synthase PDSS1 isoform X1

  2. XM_061996645.1 → XP_061852629.1  all trans-polyprenyl-diphosphate synthase PDSS1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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