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LOC104531351 BCL9 transcription coactivator [ Antrostomus carolinensis (chuck-will's-widow) ]

Gene ID: 104531351, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104531351
Gene description
BCL9 transcription coactivator
Gene type
protein coding
RefSeq status
MODEL
Organism
Antrostomus carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Caprimulgiformes; Caprimulgidae; Antrostomus
Also known as
BCL9
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM70074v1 (GCF_000700745.1) Unplaced Scaffold NW_010340624.1 (469..10549)

NW_010340624.1Genomic Context describing neighboring genes Neighboring gene acid phosphatase 6, lysophosphatidic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010340624 Unplaced Scaffold Reference ASM70074v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin-TCF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: B-cell CLL/lymphoma 9 protein
Names
B cell CLL/lymphoma 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Antrostomus carolinensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70074v1

Genomic

  1. NW_010340624.1 Reference ASM70074v1

    Range
    469..10549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029087033.1 → XP_028942866.1  LOW QUALITY PROTEIN: B-cell CLL/lymphoma 9 protein

    Conserved Domains (4) summary
    TIGR01628
    Location:1288 → 1382
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    PRK14954
    Location:195 → 299
    PRK14954; DNA polymerase III subunits gamma and tau; Provisional
    PHA03247
    Location:552 → 1167
    PHA03247; large tegument protein UL36; Provisional
    pfam11502
    Location:329 → 367
    BCL9; B-cell lymphoma 9 protein
Nucleotide Protein
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