U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BMAL1 basic helix-loop-helix ARNT like 1 [ Eurypyga helias (sunbittern) ]

Gene ID: 104509045, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
BMAL1
Gene description
basic helix-loop-helix ARNT like 1
Locus tag
N326_10971
Gene type
protein coding
RefSeq status
MODEL
Organism
Eurypyga helias
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Eurypygimorphae; Eurypygiformes; Eurypygidae; Eurypyga
Also known as
ARNTL
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM69077v1 (GCF_000690775.1) Unplaced Scaffold NW_010225891.1 (24901..50732)

NW_010225891.1Genomic Context describing neighboring genes Neighboring gene BTB domain containing 10

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010225891.1 Unplaced Scaffold Reference ASM69077v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian rhythm IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
aryl hydrocarbon receptor nuclear translocator-like protein 1
Names
Aryl hydrocarbon receptor nuclear translocator-like 1
aryl hydrocarbon receptor nuclear translocator like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Eurypyga helias Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69077v1

Genomic

  1. NW_010225891.1 Reference ASM69077v1

    Range
    24901..50732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010150858.1 → XP_010149160.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X1

    Conserved Domains (5) summary
    smart00091
    Location:156 → 215
    PAS; PAS domain
    cd00130
    Location:348 → 443
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00010
    Location:81 → 133
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:153 → 260
    PAS; PAS fold
    pfam14598
    Location:346 → 451
    PAS_11; PAS domain

  2. XM_010150866.1 → XP_010149168.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_010149168.1

    UniProtKB/TrEMBL
    A0A093IDJ4
    Conserved Domains (5) summary
    smart00091
    Location:149 → 208
    PAS; PAS domain
    cd00130
    Location:341 → 436
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00010
    Location:74 → 126
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:146 → 253
    PAS; PAS fold
    pfam14598
    Location:339 → 444
    PAS_11; PAS domain

  3. XM_010150874.1 → XP_010149176.1  aryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X3

    Conserved Domains (5) summary
    smart00091
    Location:149 → 208
    PAS; PAS domain
    cd00130
    Location:340 → 435
    PAS; PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising identification of a PAS domain was that in EAG-like K+-channels. PAS domains have been found to bind ligands, and to act as sensors for light and oxygen in ...
    pfam00010
    Location:74 → 126
    HLH; Helix-loop-helix DNA-binding domain
    pfam00989
    Location:146 → 253
    PAS; PAS fold
    pfam14598
    Location:338 → 443
    PAS_11; PAS domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.