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MAP1LC3B microtubule associated protein 1 light chain 3 beta [ Buceros rhinoceros silvestris ]

Gene ID: 104496998, updated on 12-Mar-2024

Summary

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Gene symbol
MAP1LC3B
Gene description
microtubule associated protein 1 light chain 3 beta
Locus tag
N320_01410
Gene type
protein coding
RefSeq status
MODEL
Organism
Buceros rhinoceros silvestris (sub-species: silvestris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Bucerotiformes; Bucerotidae; Buceros
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM71030v1 (GCF_000710305.1) Unplaced Scaffold NW_010422847.1 (50882..55712, complement)

NW_010422847.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCHC-type containing 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010422847.1 Unplaced Scaffold Reference ASM71030v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated proteins 1A/1B light chain 3B
Names
Microtubule-associated proteins 1A/1B light chain 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Buceros rhinoceros silvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM71030v1

Genomic

  1. NW_010422847.1 Reference ASM71030v1

    Range
    50882..55712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010140204.1 → XP_010138506.1  microtubule-associated proteins 1A/1B light chain 3B

    UniProtKB/TrEMBL
    A0A091H8Q3
    Conserved Domains (1) summary
    cd01611
    Location:8 → 114
    GABARAP; Ubiquitin domain of GABA-receptor-associated protein
Nucleotide Protein
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