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SEC24D SEC24 homolog D, COPII coat complex component [ Buceros rhinoceros silvestris ]

Gene ID: 104489297, updated on 12-Mar-2024

Summary

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Gene symbol
SEC24D
Gene description
SEC24 homolog D, COPII coat complex component
Locus tag
N320_12277
Gene type
protein coding
RefSeq status
MODEL
Organism
Buceros rhinoceros silvestris (sub-species: silvestris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Bucerotiformes; Bucerotidae; Buceros
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM71030v1 (GCF_000710305.1) Unplaced Scaffold NW_010399399.1 (21316..62405, complement)

NW_010399399.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010399399.1 Unplaced Scaffold Reference ASM71030v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24D
Names
Protein transport protein Sec24D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Buceros rhinoceros silvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM71030v1

Genomic

  1. NW_010399399.1 Reference ASM71030v1

    Range
    21316..62405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010131443.1 → XP_010129745.1  protein transport protein Sec24D

    See identical proteins and their annotated locations for XP_010129745.1

    UniProtKB/TrEMBL
    A0A091HHL3
    Conserved Domains (7) summary
    COG5028
    Location:171 → 1030
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    cd01479
    Location:440 → 687
    Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
    pfam00626
    Location:904 → 977
    Gelsolin; Gelsolin repeat
    pfam04810
    Location:363 → 400
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:788 → 884
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:689 → 773
    Sec23_BS; Sec23/Sec24 beta-sandwich domain
    pfam11235
    Location:54 → 255
    Med25_SD1; Mediator complex subunit 25 synapsin 1
Nucleotide Protein
Heading Accession and Version

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