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    ribF riboflavin biosynthesis protein RibF [ Chlamydophila pecorum E58 ]

    Gene ID: 10448424, updated on 4-May-2013
    Gene symbol
    ribF
    Gene description
    riboflavin biosynthesis protein RibF
    Locus tag
    G5S_0815
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Chlamydophila pecorum E58 (strain: E58, culture-collection: ATCC:VR-628, old-name: Chlamydophila pecorum, gb-synonym: Chlamydia pecorum E58)
    Lineage
    Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia
    Sequence :
    NC_015408.1 (798575..799501, complement)

    NC_015408.1Genomic Context describing neighboring genes Neighboring gene HrcV family type III secretion protein Neighboring gene HrpY/HrcU family type III secretion protein Neighboring gene GTP-binding protein YchF Neighboring gene tRNA pseudouridine synthase B Neighboring gene translation initiation factor IF-2 Neighboring gene ribosome-binding factor A Neighboring gene transcription termination factor NusA

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of the obligate intracellular animal pathogen Chlamydia pecorum E58. Mojica S, et al. J Bacteriol, 2011 Jul. PMID 21571992.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    riboflavin biosynthesis protein RibF

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015408.1

      Range
      798575..799501, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_004377462.1 riboflavin biosynthesis protein RibF [Chlamydophila pecorum E58]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      F4DIT6
      Conserved Domains (3) summary
      PRK05627
      Location:22 – 304
      Blast Score: 839
      PRK05627; bifunctional riboflavin kinase/FMN adenylyltransferase; Reviewed
      cd02064
      Location:25 – 197
      Blast Score: 531
      FAD_synthetase_N; FAD synthetase, N-terminal domain of the bifunctional enzyme
      smart00904
      Location:184 – 305
      Blast Score: 389
      Flavokinase; Riboflavin kinase
    Nucleotide Protein
    Heading Accession and Version
    genomic CP002608.1 AEB41759.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

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