U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRBD1 S1 RNA binding domain 1 [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104471851, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SRBD1
Gene description
S1 RNA binding domain 1
Locus tag
N339_10307
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Ciconiiformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SRBD1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010105315.1 (196557..318846, complement)

NW_010105315.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_010105315.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleobase-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
S1 RNA-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010105315.1 Reference ASM69924v1

    Range
    196557..318846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010087342.1 → XP_010085644.1  S1 RNA-binding domain-containing protein 1

    UniProtKB/TrEMBL
    A0A093BYX1
    Conserved Domains (5) summary
    COG2183
    Location:170 → 942
    Tex; Transcriptional accessory protein Tex/SPT6 [Transcription]
    cd05685
    Location:870 → 941
    S1_Tex; S1_Tex: The C-terminal S1 domain of a transcription accessory factor called Tex, which has been characterized in Bordetella pertussis and Pseudomonas aeruginosa. The tex gene is essential in Bortella pertusis and is named for its role in toxin expression. ...
    pfam09371
    Location:179 → 364
    Tex_N; Tex-like protein N-terminal domain
    pfam12836
    Location:665 → 727
    HHH_3; Helix-hairpin-helix motif
    pfam16921
    Location:500 → 623
    Tex_YqgF; Tex protein YqgF-like domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.