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LHX6 LIM homeobox 6 [ Pterocles gutturalis (yellow-throated sandgrouse) ]

Gene ID: 104466404, updated on 12-Mar-2024

Summary

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Gene symbol
LHX6
Gene description
LIM homeobox 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Pterocles gutturalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Ciconiiformes; Pteroclidae; Pterocles
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM69924v1 (GCF_000699245.1) Unplaced Scaffold NW_010128952.1 (64559..71689, complement)

NW_010128952.1Genomic Context describing neighboring genes Neighboring gene choline transporter-like protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010128952.1 Unplaced Scaffold Reference ASM69924v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in forebrain neuron development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pterocles gutturalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69924v1

Genomic

  1. NW_010128952.1 Reference ASM69924v1

    Range
    64559..71689 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010079802.1 → XP_010078104.1  LOW QUALITY PROTEIN: LIM/homeobox protein Lhx6

    Conserved Domains (3) summary
    cd09383
    Location:58 → 112
    LIM2_Lhx7_Lhx8; The second LIM domain of Lhx7 and Lhx8
    pfam00046
    Location:151 → 203
    Homeobox; Homeobox domain
    cl02475
    Location:9 → 51
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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