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SATB2 SATB homeobox 2 [ Nestor notabilis (Kea) ]

Gene ID: 104407092, updated on 12-Mar-2024

Summary

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Gene symbol
SATB2
Gene description
SATB homeobox 2
Locus tag
N333_11335
Gene type
protein coding
RefSeq status
MODEL
Organism
Nestor notabilis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Psittaciformes; Psittacidae; Nestor
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM69687v1 (GCF_000696875.1) Unplaced Scaffold NW_009932245.1 (19234..128400)

NW_009932245.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009932245.1 Unplaced Scaffold Reference ASM69687v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein SATB2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nestor notabilis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69687v1

Genomic

  1. NW_009932245.1 Reference ASM69687v1

    Range
    19234..128400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010016276.1 → XP_010014578.1  DNA-binding protein SATB2

    UniProtKB/TrEMBL
    A0A091S3V2
    Conserved Domains (4) summary
    smart00389
    Location:544 → 601
    HOX; Homeodomain
    cd11585
    Location:2 → 97
    SATB1_N; N-terminal domain of SATB1 and similar proteins
    pfam02376
    Location:413 → 487
    CUT; CUT domain
    pfam16557
    Location:128 → 167
    CUTL; CUT1-like DNA-binding domain of SATB
Nucleotide Protein
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