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SUB1 SUB1 regulator of transcription [ Chaetura pelagica (chimney swift) ]

Gene ID: 104398606, updated on 12-Mar-2024

Summary

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Gene symbol
SUB1
Gene description
SUB1 regulator of transcription
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See SUB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952481.1 (3435452..3448283, complement)

NW_009952481.1Genomic Context describing neighboring genes Neighboring gene threonyl-tRNA synthetase 1 Neighboring gene natriuretic peptide receptor 3 Neighboring gene zinc finger RNA binding protein Neighboring gene myotubularin related protein 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952481.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription initiation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activated RNA polymerase II transcriptional coactivator p15
Names
Activated RNA polymerase II transcriptional coactivator p15
SUB1 homolog, transcriptional regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952481.1 Reference ChaPel_1.0

    Range
    3435452..3448283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010008739.1 → XP_010007041.1  activated RNA polymerase II transcriptional coactivator p15

    See identical proteins and their annotated locations for XP_010007041.1

    Conserved Domains (1) summary
    pfam02229
    Location:67 → 114
    PC4; Transcriptional Coactivator p15 (PC4)
Nucleotide Protein
Heading Accession and Version

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