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FASN fatty acid synthase [ Chaetura pelagica (chimney swift) ]

Gene ID: 104398526, updated on 12-Mar-2024

Summary

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Gene symbol
FASN
Gene description
fatty acid synthase
Locus tag
M959_15155
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
42
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952479.1 (1053319..1085992, complement)

NW_009952479.1Genomic Context describing neighboring genes Neighboring gene G protein pathway suppressor 1 Neighboring gene dihydrouridine synthase 1 like Neighboring gene solute carrier family 16 member 3 Neighboring gene casein kinase 1 delta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952479.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952479.1 Reference ChaPel_1.0

    Range
    1053319..1085992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010008649.1 → XP_010006951.1  fatty acid synthase

    Conserved Domains (12) summary
    cd05195
    Location:1569 → 1858
    enoyl_red; enoyl reductase of polyketide synthase
    cd08954
    Location:1880 → 2115
    KR_1_FAS_SDR_x; beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 1, complex (x) SDRs
    smart00823
    Location:2127 → 2188
    PKS_PP; Phosphopantetheine attachment site
    smart00829
    Location:1568 → 1858
    PKS_ER; Enoylreductase
    COG3321
    Location:1 → 1013
    PksD; Acyl transferase domain in polyketide synthase (PKS) enzymes [Secondary metabolites biosynthesis, transport and catabolism]
    cd00833
    Location:2 → 404
    PKS; polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or ...
    TIGR02072
    Location:1238 → 1397
    BioC; malonyl-acyl carrier protein O-methyltransferase BioC
    pfam00698
    Location:492 → 809
    Acyl_transf_1; Acyl transferase domain
    pfam00975
    Location:2250 → 2509
    Thioesterase; Thioesterase domain
    pfam16197
    Location:362 → 473
    KAsynt_C_assoc; Ketoacyl-synthetase C-terminal extension
    cl00509
    Location:874 → 1067
    hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    cl21454
    Location:1321 → 1553
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
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