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RBM47 RNA binding motif protein 47 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104396276, updated on 12-Mar-2024

Summary

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Gene symbol
RBM47
Gene description
RNA binding motif protein 47
Locus tag
M959_04233
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009970716.1 (3130224..3137283)

NW_009970716.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein binding family B member 2 Neighboring gene NOP2/Sun RNA methyltransferase family member 7 Neighboring gene cholinergic receptor nicotinic alpha 9 subunit Neighboring gene ras homolog family member H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009970716.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 47

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009970716.1 Reference ChaPel_1.0

    Range
    3130224..3137283
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010006101.1 → XP_010004403.1  RNA-binding protein 47 isoform X2

    See identical proteins and their annotated locations for XP_010004403.1

    Conserved Domains (4) summary
    cd12485
    Location:70 → 147
    RRM1_RBM47; RNA recognition motif 1 found in vertebrate RNA-binding protein 47 (RBM47)
    cd12491
    Location:150 → 238
    RRM2_RBM47; RNA recognition motif 2 in vertebrate RNA-binding protein 47 (RBM47)
    cd12497
    Location:245 → 318
    RRM3_RBM47; RNA recognition motif 3 in vertebrate RNA-binding protein 47 (RBM47)
    TIGR01648
    Location:20 → 596
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family

  2. XM_010006100.1 → XP_010004402.1  RNA-binding protein 47 isoform X1

    Conserved Domains (4) summary
    cd12485
    Location:70 → 147
    RRM1_RBM47; RNA recognition motif 1 found in vertebrate RNA-binding protein 47 (RBM47)
    cd12491
    Location:150 → 238
    RRM2_RBM47; RNA recognition motif 2 in vertebrate RNA-binding protein 47 (RBM47)
    cd12497
    Location:245 → 318
    RRM3_RBM47; RNA recognition motif 3 in vertebrate RNA-binding protein 47 (RBM47)
    TIGR01648
    Location:20 → 527
    hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
Nucleotide Protein
Heading Accession and Version

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