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LRFN1 leucine rich repeat and fibronectin type III domain containing 1 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104395911, updated on 12-Mar-2024

Summary

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Gene symbol
LRFN1
Gene description
leucine rich repeat and fibronectin type III domain containing 1
Locus tag
M959_13592
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009954707.1 (216932..220385)

NW_009954707.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009954707.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat and fibronectin type III domain-containing protein 1
Names
Leucine-rich repeat and fibronectin type-III domain-containing protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009954707.1 Reference ChaPel_1.0

    Range
    216932..220385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010005660.1 → XP_010003962.1  leucine-rich repeat and fibronectin type III domain-containing protein 1

    Conserved Domains (6) summary
    cd00116
    Location:41 → 207
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:53 → 76
    LRR_RI; leucine-rich repeat [structural motif]
    pfam00041
    Location:401 → 474
    fn3; Fibronectin type III domain
    pfam13855
    Location:99 → 159
    LRR_8; Leucine rich repeat
    cl11960
    Location:301 → 364
    Ig; Immunoglobulin domain
    cl15307
    Location:240 → 272
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
Nucleotide Protein
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