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HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 [ Chaetura pelagica (chimney swift) ]

Gene ID: 104390936, updated on 12-Mar-2024

Summary

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Gene symbol
HOGA1
Gene description
4-hydroxy-2-oxoglutarate aldolase 1
Locus tag
M959_09952
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953651.1 (3254282..3258615, complement)

NW_009953651.1Genomic Context describing neighboring genes Neighboring gene MORN repeat containing 4 Neighboring gene MORN repeat-containing protein 4 Neighboring gene ankyrin repeat domain 2 Neighboring gene ubiquitin domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953651.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxy-tetrahydrodipicolinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N-acetylneuraminate lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylneuraminate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxy-2-oxoglutarate aldolase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953651.1 Reference ChaPel_1.0

    Range
    3254282..3258615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010000145.1 → XP_009998447.1  4-hydroxy-2-oxoglutarate aldolase, mitochondrial

    Conserved Domains (1) summary
    cd00408
    Location:44 → 284
    DHDPS-like; Dihydrodipicolinate synthase family
Nucleotide Protein
Heading Accession and Version

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