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ZC3H12C zinc finger CCCH-type containing 12C [ Chaetura pelagica (chimney swift) ]

Gene ID: 104390288, updated on 12-Mar-2024

Summary

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Gene symbol
ZC3H12C
Gene description
zinc finger CCCH-type containing 12C
Locus tag
M959_14492
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009953505.1 (4001087..4027350)

NW_009953505.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 10 Neighboring gene chromosome unknown open reading frame, human C11orf87 Neighboring gene radixin Neighboring gene ferredoxin 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009953505.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ribonuclease ZC3H12C
Names
putative ribonuclease ZC3H12C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009953505.1 Reference ChaPel_1.0

    Range
    4001087..4027350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009999395.1 → XP_009997697.1  probable ribonuclease ZC3H12C

    Conserved Domains (2) summary
    PHA03160
    Location:482 → 756
    PHA03160; hypothetical protein; Provisional
    pfam11977
    Location:250 → 406
    RNase_Zc3h12a; Zc3h12a-like Ribonuclease NYN domain
Nucleotide Protein
Heading Accession and Version

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