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ESRRB estrogen related receptor beta [ Chaetura pelagica (chimney swift) ]

Gene ID: 104385442, updated on 12-Mar-2024

Summary

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Gene symbol
ESRRB
Gene description
estrogen related receptor beta
Locus tag
M959_01130
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952694.1 (5485820..5586039)

NW_009952694.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 43 Neighboring gene G-patch domain containing 2 like Neighboring gene vasohibin 1 Neighboring gene angel homolog 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952694.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear steroid receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
steroid hormone receptor ERR2
Names
Steroid hormone receptor ERR2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952694.1 Reference ChaPel_1.0

    Range
    5485820..5586039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009993894.1 → XP_009992196.1  steroid hormone receptor ERR2 isoform X2

    See identical proteins and their annotated locations for XP_009992196.1

    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  2. XM_009993895.1 → XP_009992197.1  steroid hormone receptor ERR2 isoform X2

    See identical proteins and their annotated locations for XP_009992197.1

    Conserved Domains (2) summary
    cd06946
    Location:212 → 431
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cd07170
    Location:98 → 193
    NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

  3. XM_009993893.1 → XP_009992195.1  steroid hormone receptor ERR2 isoform X1

    Conserved Domains (2) summary
    cd06946
    Location:173 → 392
    NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    cl02596
    Location:98 → 154
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers
Nucleotide Protein
Heading Accession and Version

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