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DEAF1 DEAF1 transcription factor [ Chaetura pelagica (chimney swift) ]

Gene ID: 104385141, updated on 12-Mar-2024

Summary

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Gene symbol
DEAF1
Gene description
DEAF1 transcription factor
Locus tag
M959_12193
Gene type
protein coding
RefSeq status
MODEL
Organism
Chaetura pelagica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Caprimulgimorphae; Apodiformes; Apodidae; Apodinae; Chaetura
Orthologs
human mouse all
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Genomic context

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See DEAF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ChaPel_1.0 (GCF_000747805.1) Unplaced Scaffold NW_009952571.1 (267339..286978, complement)

NW_009952571.1Genomic Context describing neighboring genes Neighboring gene glucagon family neuropeptides-like Neighboring gene dopamine receptor D4 Neighboring gene transmembrane protein 80 Neighboring gene EPS8 signaling adaptor L2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009952571.1 Unplaced Scaffold Reference ChaPel_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deformed epidermal autoregulatory factor 1 homolog
Names
Deformed epidermal autoregulatory factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chaetura pelagica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChaPel_1.0

Genomic

  1. NW_009952571.1 Reference ChaPel_1.0

    Range
    267339..286978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009993554.1 → XP_009991856.1  deformed epidermal autoregulatory factor 1 homolog

    UniProtKB/TrEMBL
    A0A093DGJ0
    Conserved Domains (2) summary
    pfam01342
    Location:115 → 189
    SAND; SAND domain
    pfam01753
    Location:422 → 458
    zf-MYND; MYND finger
Nucleotide Protein
Heading Accession and Version

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