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VPS13C vacuolar protein sorting 13 homolog C [ Tauraco erythrolophus (red-crested turaco) ]

Gene ID: 104371610, updated on 12-Mar-2024

Summary

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Gene symbol
VPS13C
Gene description
vacuolar protein sorting 13 homolog C
Gene type
protein coding
RefSeq status
MODEL
Organism
Tauraco erythrolophus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Musophagiformes; Musophagidae; Tauraco
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
100 current ASM70936v1 (GCF_000709365.1) Unplaced Scaffold NW_010035711.1 (517..42991, complement)

NW_010035711.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_010035711.1 Unplaced Scaffold Reference ASM70936v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein retention in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extrinsic component of membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tauraco erythrolophus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70936v1

Genomic

  1. NW_010035711.1 Reference ASM70936v1

    Range
    517..42991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009984363.1 → XP_009982665.1  LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13C

    Conserved Domains (3) summary
    COG5043
    Location:599 → 2028
    MRS6; Vacuolar protein sorting-associated protein [Intracellular trafficking and secretion]
    pfam06650
    Location:2180 → 2431
    SHR-BD; SHR-binding domain of vacuolar-sorting associated protein 13
    pfam16910
    Location:41 → 260
    VPS13_mid_rpt; Repeating coiled region of VPS13
Nucleotide Protein
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