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AMIGO2 adhesion molecule with Ig like domain 2 [ Tyto alba (common barn owl) ]

Gene ID: 104360792, updated on 12-Mar-2024

Summary

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Gene symbol
AMIGO2
Gene description
adhesion molecule with Ig like domain 2
Locus tag
N341_01461
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881282.1 (56075355..56101481)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009998341.1 (6357..8086)

NW_024881282.1Genomic Context describing neighboring genes Neighboring gene ATP23 metallopeptidase and ATP synthase assembly factor homolog Neighboring gene RNA polymerase II associated protein 3 Neighboring gene solute carrier family 38 member 4 Neighboring gene solute carrier family 38 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amphoterin-induced protein 2
Names
Amphoterin-induced protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881282.1 Reference T.alba_DEE_v4.0

    Range
    56075355..56101481
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042793247.1 → XP_042649181.1  amphoterin-induced protein 2

    UniProtKB/TrEMBL
    A0A093F957
    Conserved Domains (4) summary
    COG4886
    Location:52 → 228
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:68 → 93
    LRR_RI; leucine-rich repeat [structural motif]
    cd00096
    Location:326 → 328
    Ig; Ig strand C' [structural motif]
    cl11960
    Location:321 → 378
    Ig; Immunoglobulin domain

  2. XM_032999922.2 → XP_032855813.1  amphoterin-induced protein 2

    UniProtKB/TrEMBL
    A0A093F957
    Conserved Domains (4) summary
    COG4886
    Location:52 → 228
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:68 → 93
    LRR_RI; leucine-rich repeat [structural motif]
    cd00096
    Location:326 → 328
    Ig; Ig strand C' [structural motif]
    cl11960
    Location:321 → 378
    Ig; Immunoglobulin domain

RNA

  1. XR_006165372.1 RNA Sequence

  2. XR_006165371.1 RNA Sequence

  3. XR_006165369.1 RNA Sequence

  4. XR_006165370.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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