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CCR6 C-C motif chemokine receptor 6 [ Tyto alba (common barn owl) ]

Gene ID: 104358423, updated on 12-Mar-2024

Summary

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Gene symbol
CCR6
Gene description
C-C motif chemokine receptor 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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See CCR6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881296.1 (14272910..14285838, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009988951.1 (11784..37193, complement)

NW_024881296.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116962626 Neighboring gene tubulin tyrosine ligase like 2 Neighboring gene centrosomal protein 43 Neighboring gene ribonuclease T2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of dendritic cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in thymocyte migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-C chemokine receptor type 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881296.1 Reference T.alba_DEE_v4.0

    Range
    14272910..14285838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032996916.2 → XP_032852807.1  C-C chemokine receptor type 6

    Conserved Domains (2) summary
    cd14964
    Location:37 → 63
    7tm_GPCRs; TM helix 1 [structural motif]
    cl28897
    Location:37 → 319
    7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
Nucleotide Protein
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