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TMOD2 tropomodulin 2 [ Tyto alba (common barn owl) ]

Gene ID: 104356925, updated on 12-Mar-2024

Summary

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Gene symbol
TMOD2
Gene description
tropomodulin 2
Locus tag
N341_12015
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881317.1 (13658837..13695480, complement)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_009983160.1 (26735..49349, complement)

NW_024881317.1Genomic Context describing neighboring genes Neighboring gene secretogranin III Neighboring gene LysM domain containing 2 Neighboring gene uncharacterized LOC116959145 Neighboring gene tropomodulin-3 Neighboring gene LEO1 homolog, Paf1/RNA polymerase II complex component

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tropomyosin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pointed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in myofibril IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in striated muscle thin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tropomodulin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881317.1 Reference T.alba_DEE_v4.0

    Range
    13658837..13695480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042803703.1 → XP_042659637.1  tropomodulin-2

    UniProtKB/TrEMBL
    A0A093EVC4
    Conserved Domains (2) summary
    pfam03250
    Location:5 → 146
    Tropomodulin
    cl39015
    Location:215 → 291
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_032983003.2 → XP_032838894.1  tropomodulin-2

    UniProtKB/TrEMBL
    A0A093EVC4
    Conserved Domains (2) summary
    pfam03250
    Location:5 → 146
    Tropomodulin
    cl39015
    Location:215 → 291
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
Heading Accession and Version

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