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PDE6D phosphodiesterase 6D [ Tyto alba (common barn owl) ]

Gene ID: 104356433, updated on 12-Mar-2024

Summary

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Gene symbol
PDE6D
Gene description
phosphodiesterase 6D
Locus tag
N341_06086
Gene type
protein coding
RefSeq status
MODEL
Organism
Tyto alba
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Strigiformes; Tytonidae; Tyto
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current T.alba_DEE_v4.0 (GCF_018691265.1) Unplaced Scaffold NW_024881262.1 (11821853..11860518)
100 previous assembly ASM68720v1 (GCF_000687205.1) Unplaced Scaffold NW_010019110.1 (1033..9955, complement)

NW_024881262.1Genomic Context describing neighboring genes Neighboring gene natriuretic peptide C Neighboring gene COP9 signalosome subunit 7B Neighboring gene uncharacterized LOC122153808 Neighboring gene uncharacterized LOC116958979 Neighboring gene prothymosin alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in sensory perception of light stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Names
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Tyto alba Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T.alba_DEE_v4.0

Genomic

  1. NW_024881262.1 Reference T.alba_DEE_v4.0

    Range
    11821853..11860518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042796995.1 → XP_042652929.1  retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X1

    Conserved Domains (1) summary
    pfam05351
    Location:10 → 149
    GMP_PDE_delta; GMP-PDE, delta subunit

  2. XM_032982424.2 → XP_032838315.1  retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta isoform X2

    Conserved Domains (1) summary
    pfam05351
    Location:1 → 130
    GMP_PDE_delta; GMP-PDE, delta subunit
Nucleotide Protein
Heading Accession and Version

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