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BCL6 BCL6 transcription repressor [ Leptosomus discolor (cuckoo roller) ]

Gene ID: 104340752, updated on 12-Mar-2024

Summary

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Gene symbol
BCL6
Gene description
BCL6 transcription repressor
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptosomus discolor
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coraciiformes; Leptosomidae; Leptosomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM69178v1 (GCF_000691785.1) Unplaced Scaffold NW_009874846.1 (289..8053, complement)

NW_009874846.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009874846.1 Unplaced Scaffold Reference ASM69178v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
B-cell lymphoma 6 protein
Names
B cell CLL/lymphoma 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptosomus discolor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69178v1

Genomic

  1. NW_009874846.1 Reference ASM69178v1

    Range
    289..8053 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009955721.1 → XP_009954023.1  B-cell lymphoma 6 protein isoform X2

    Conserved Domains (5) summary
    smart00225
    Location:33 → 129
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:523 → 543
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:521 → 543
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:22 → 126
    BTB; BTB/POZ domain
    pfam13465
    Location:535 → 560
    zf-H2C2_2; Zinc-finger double domain

  2. XM_009955720.1 → XP_009954022.1  B-cell lymphoma 6 protein isoform X1

    See identical proteins and their annotated locations for XP_009954022.1

    Conserved Domains (4) summary
    smart00225
    Location:33 → 129
    BTB; Broad-Complex, Tramtrack and Bric a brac
    sd00017
    Location:579 → 599
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:22 → 126
    BTB; BTB/POZ domain
    pfam13465
    Location:591 → 616
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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