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TKT transketolase [ Opisthocomus hoazin ]

Gene ID: 104338433, updated on 12-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
Locus tag
N306_12216
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009899966.1 (316366..335736)

NW_009899966.1Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel subunit alpha1 D Neighboring gene decapping mRNA 1A Neighboring gene FA complementation group D2 Neighboring gene ER membrane protein complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009899966.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009899966.1 Reference ASM69207v1

    Range
    316366..335736
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009944474.1 → XP_009942776.1  transketolase isoform X1

    UniProtKB/TrEMBL
    A0A091VJD0
    Conserved Domains (4) summary
    cd07033
    Location:296 → 451
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:14 → 597
    PRK05899; transketolase; Reviewed
    cd02012
    Location:14 → 248
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:469 → 589
    Transketolase_C; Transketolase, C-terminal domain

  2. XM_009944475.1 → XP_009942777.1  transketolase isoform X2

    UniProtKB/TrEMBL
    A0A091VJD0
    Conserved Domains (4) summary
    cd07033
    Location:277 → 432
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:1 → 578
    PRK05899; transketolase; Reviewed
    cd02012
    Location:1 → 229
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:450 → 570
    Transketolase_C; Transketolase, C-terminal domain

  3. XM_009944476.1 → XP_009942778.1  transketolase isoform X3

    UniProtKB/TrEMBL
    A0A091VJD0
    Conserved Domains (4) summary
    cd07033
    Location:234 → 389
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:1 → 535
    PRK05899; transketolase; Reviewed
    cd02012
    Location:1 → 186
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:407 → 527
    Transketolase_C; Transketolase, C-terminal domain
Nucleotide Protein
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