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OTX2 orthodenticle homeobox 2 [ Opisthocomus hoazin ]

Gene ID: 104335835, updated on 12-Mar-2024

Summary

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Gene symbol
OTX2
Gene description
orthodenticle homeobox 2
Locus tag
N306_12545
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009902963.1 (149443..164413, complement)

NW_009902963.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 260 Neighboring gene exocyst complex component 5 Neighboring gene adaptor related protein complex 5 subunit mu 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009902963.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein OTX2
Names
Homeobox protein OTX2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009902963.1 Reference ASM69207v1

    Range
    149443..164413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009941612.1 → XP_009939914.1  homeobox protein OTX2

    Conserved Domains (2) summary
    pfam00046
    Location:49 → 97
    Homeobox; Homeobox domain
    pfam03529
    Location:156 → 237
    TF_Otx; Otx1 transcription factor
Nucleotide Protein
Heading Accession and Version

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