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POLR1B RNA polymerase I subunit B [ Opisthocomus hoazin ]

Gene ID: 104334351, updated on 12-Mar-2024

Summary

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Gene symbol
POLR1B
Gene description
RNA polymerase I subunit B
Locus tag
N306_12859
Gene type
protein coding
RefSeq status
MODEL
Organism
Opisthocomus hoazin
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Opisthocomiformes; Opisthocomidae; Opisthocomus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current ASM69207v1 (GCF_000692075.1) Unplaced Scaffold NW_009902625.1 (873162..889187)

NW_009902625.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 7 Neighboring gene tubulin tyrosine ligase Neighboring gene uncharacterized LOC104334352 Neighboring gene peroxisomal biogenesis factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009902625.1 Unplaced Scaffold Reference ASM69207v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase I complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase I subunit RPA2
Names
polymerase (RNA) I polypeptide B, 128kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Opisthocomus hoazin Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69207v1

Genomic

  1. NW_009902625.1 Reference ASM69207v1

    Range
    873162..889187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009939957.1 → XP_009938259.1  DNA-directed RNA polymerase I subunit RPA2

    UniProtKB/TrEMBL
    A0A091WH22
    Conserved Domains (4) summary
    PRK08565
    Location:1 → 1011
    PRK08565; DNA-directed RNA polymerase subunit B; Provisional
    cd00653
    Location:3 → 1009
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04561
    Location:114 → 251
    RNA_pol_Rpb2_2; RNA polymerase Rpb2, domain 2
    pfam06883
    Location:439 → 492
    RNA_pol_Rpa2_4; RNA polymerase I, Rpa2 specific domain
Nucleotide Protein
Heading Accession and Version

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