U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CCDC40 coiled-coil domain 40 molecular ruler complex subunit [ Haliaeetus albicilla (white-tailed eagle) ]

Gene ID: 104316020, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CCDC40
Gene description
coiled-coil domain 40 molecular ruler complex subunit
Locus tag
N329_08600
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus albicilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CCDC40 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current ASM69140v1 (GCF_000691405.1) Unplaced Scaffold NW_009765582.1 (106..13155)

NW_009765582.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_009765582.1 Unplaced Scaffold Reference ASM69140v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axoneme assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in epithelial cilium movement involved in determination of left/right asymmetry IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart looping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: coiled-coil domain-containing protein 40
Names
Coiled-coil domain-containing protein 40
coiled-coil domain containing 40

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Haliaeetus albicilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69140v1

Genomic

  1. NW_009765582.1 Reference ASM69140v1

    Range
    106..13155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009916213.1 → XP_009914515.1  LOW QUALITY PROTEIN: coiled-coil domain-containing protein 40

    UniProtKB/TrEMBL
    A0A7K7NP09
    Conserved Domains (1) summary
    pfam08647
    Location:710 → 809
    BRE1; BRE1 E3 ubiquitin ligase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.