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STRN striatin [ Haliaeetus albicilla (white-tailed eagle) ]

Gene ID: 104314915, updated on 12-Mar-2024

Summary

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Gene symbol
STRN
Gene description
striatin
Locus tag
N329_04703
Gene type
protein coding
RefSeq status
MODEL
Organism
Haliaeetus albicilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Accipitriformes; Accipitridae; Accipitrinae; Haliaeetus
Orthologs
human mouse all
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Genomic context

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See STRN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current ASM69140v1 (GCF_000691405.1) Unplaced Scaffold NW_009761816.1 (1617..43984)

NW_009761816.1Genomic Context describing neighboring genes Neighboring gene vitrin Neighboring gene opsin-5-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009761816.1 Unplaced Scaffold Reference ASM69140v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables armadillo repeat domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 2A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-containing complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
striatin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Haliaeetus albicilla Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69140v1

Genomic

  1. NW_009761816.1 Reference ASM69140v1

    Range
    1617..43984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009914613.1 → XP_009912915.1  striatin isoform X1

    UniProtKB/TrEMBL
    A0A091P1T7
    Conserved Domains (4) summary
    COG2319
    Location:328 → 672
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:354 → 678
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam08232
    Location:23 → 44
    Striatin; Striatin family
    sd00039
    Location:368 → 413
    7WD40; WD40 repeat [structural motif]

  2. XM_009914614.1 → XP_009912916.1  striatin isoform X2

    Conserved Domains (3) summary
    COG2319
    Location:222 → 551
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:228 → 552
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:242 → 287
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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