U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HACL1 2-hydroxyacyl-CoA lyase 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104307537, updated on 12-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HACL1
Gene description
2-hydroxyacyl-CoA lyase 1
Locus tag
N307_11116
See related
EnsemblRapid:ENSPPUG00010000349
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 4 NC_071615.1 (45457885..45483390, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009666209.1 (1375374..1401068, complement)

Chromosome 4 - NC_071615.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing A8 Neighboring gene collagen like tail subunit of asymmetric acetylcholinesterase Neighboring gene biotinidase Neighboring gene ankyrin repeat domain 28

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid alpha-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
2-hydroxyacyl-CoA lyase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071615.1 Reference bDryPub1.pri

    Range
    45457885..45483390 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054161216.1 → XP_054017191.1  2-hydroxyacyl-CoA lyase 1

    Related
    ENSPPUP00010000450.1, ENSPPUT00010000508.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.