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MSH2 mutS homolog 2 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104305254, updated on 12-Mar-2024

Summary

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Gene symbol
MSH2
Gene description
mutS homolog 2
Locus tag
N307_10262
See related
EnsemblRapid:ENSPPUG00010008520
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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See MSH2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 2 NC_071613.1 (16667284..16720861, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009661619.1 (996984..1050599)

Chromosome 2 - NC_071613.1Genomic Context describing neighboring genes Neighboring gene mutS homolog 6 Neighboring gene potassium two pore domain channel subfamily K member 12 Neighboring gene epithelial cell adhesion molecule Neighboring gene speedy/RINGO cell cycle regulator family member A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mismatched DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mismatch repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in somatic recombination of immunoglobulin genes involved in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MutSalpha complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA mismatch repair protein Msh2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071613.1 Reference bDryPub1.pri

    Range
    16667284..16720861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054171147.1 → XP_054027122.1  DNA mismatch repair protein Msh2

    Related
    ENSPPUP00010007993.1, ENSPPUT00010013434.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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