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CDK13 cyclin dependent kinase 13 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104304047, updated on 12-Mar-2024

Summary

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Gene symbol
CDK13
Gene description
cyclin dependent kinase 13
Locus tag
N307_00797
See related
EnsemblRapid:ENSPPUG00010001088
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 4 NC_071615.1 (30150650..30195193, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664987.1 (2739846..2773226, complement)

Chromosome 4 - NC_071615.1Genomic Context describing neighboring genes Neighboring gene succinyl-CoA:glutarate-CoA transferase Neighboring gene M-phase specific PLK1 interacting protein Neighboring gene RAS like proto-oncogene A Neighboring gene YAE1 maturation factor of ABCE1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II CTD heptapeptide repeat kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cyclin/CDK positive transcription elongation factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-dependent kinase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071615.1 Reference bDryPub1.pri

    Range
    30150650..30195193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054160994.1 → XP_054016969.1  cyclin-dependent kinase 13 isoform X3

  2. XM_054160992.1 → XP_054016967.1  cyclin-dependent kinase 13 isoform X2

  3. XM_054160991.1 → XP_054016966.1  cyclin-dependent kinase 13 isoform X1

    Related
    ENSPPUP00010001083.1, ENSPPUT00010001567.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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