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GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104302717, updated on 12-Mar-2024

Summary

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Gene symbol
GDPD1
Gene description
glycerophosphodiester phosphodiesterase domain containing 1
Locus tag
N307_07294
See related
EnsemblRapid:ENSPPUG00010017761
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 13 NC_071624.1 (29941931..29957662)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664622.1 (8698..22845, complement)

Chromosome 13 - NC_071624.1Genomic Context describing neighboring genes Neighboring gene proline rich 11 Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene yippee like 2 Neighboring gene DEAH-box helicase 40

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoric diester hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acylethanolamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophospholipase D GDPD1
Names
Glycerophosphodiester phosphodiesterase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071624.1 Reference bDryPub1.pri

    Range
    29941931..29957662
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009903249.2 → XP_009901551.1  lysophospholipase D GDPD1

    UniProtKB/TrEMBL
    A0A093GGR0
    Related
    ENSPPUP00010016815.1, ENSPPUT00010027831.1
    Conserved Domains (2) summary
    cd08612
    Location:12 → 308
    GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins
    COG0584
    Location:41 → 310
    UgpQ; Glycerophosphoryl diester phosphodiesterase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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