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BPTF bromodomain PHD finger transcription factor [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104302192, updated on 12-Mar-2024

Summary

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Gene symbol
BPTF
Gene description
bromodomain PHD finger transcription factor
Locus tag
N307_12919
See related
EnsemblRapid:ENSPPUG00010015290
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 20 NC_071631.1 (10784128..10839680, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664377.1 (1168983..1223477)

Chromosome 20 - NC_071631.1Genomic Context describing neighboring genes Neighboring gene chromosome 20 C17orf58 homolog Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene nucleolar protein 11 Neighboring gene phosphatidylinositol transfer protein cytoplasmic 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylated histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NURF complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleosome-remodeling factor subunit BPTF
Names
Nucleosome-remodeling factor subunit BPTF

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071631.1 Reference bDryPub1.pri

    Range
    10784128..10839680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009902676.2 → XP_009900978.2  nucleosome-remodeling factor subunit BPTF

    Related
    ENSPPUP00010015045.1, ENSPPUT00010025098.1
Nucleotide Protein
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