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CDK5RAP1 CDK5 regulatory subunit associated protein 1 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104301455, updated on 12-Mar-2024

Summary

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Gene symbol
CDK5RAP1
Gene description
CDK5 regulatory subunit associated protein 1
See related
EnsemblRapid:ENSPPUG00010008708
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 26
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 26 NC_071637.1 (15855672..15863585)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009664232.1 (740975..747313, complement)

Chromosome 26 - NC_071637.1Genomic Context describing neighboring genes Neighboring gene KIAA1755 ortholog Neighboring gene bactericidal permeability-increasing protein Neighboring gene BPI fold containing family B member 2 Neighboring gene BPI fold containing family B member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables N6-isopentenyladenosine methylthiotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial tRNA methylthiotransferase CDK5RAP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071637.1 Reference bDryPub1.pri

    Range
    15855672..15863585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054173479.1 → XP_054029454.1  mitochondrial tRNA methylthiotransferase CDK5RAP1

    Related
    ENSPPUP00010008172.1, ENSPPUT00010013675.1
Nucleotide Protein
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Gene LinkOut

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