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KLF3 KLF transcription factor 3 [ Dryobates pubescens (Downy woodpecker) ]

Gene ID: 104296717, updated on 12-Mar-2024

Summary

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Gene symbol
KLF3
Gene description
KLF transcription factor 3
See related
EnsemblRapid:ENSPPUG00010017028
Gene type
protein coding
RefSeq status
MODEL
Organism
Dryobates pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Dryobates
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current bDryPub1.pri (GCF_014839835.1) 1 NC_071612.1 (36948019..36975726, complement)
100 previous assembly ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009662647.1 (1506981..1530166)

Chromosome 1 - NC_071612.1Genomic Context describing neighboring genes Neighboring gene toll-like receptor 1 Neighboring gene toll-like receptor 6 Neighboring gene TBC1 domain family member 1 Neighboring gene phosphoglucomutase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 3
Names
Kruppel like factor 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_014839835.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bDryPub1.pri

Genomic

  1. NC_071612.1 Reference bDryPub1.pri

    Range
    36948019..36975726 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054164065.1 → XP_054020040.1  Krueppel-like factor 3

    UniProtKB/TrEMBL
    A0A093G5J3

  2. XM_009896560.2 → XP_009894862.1  Krueppel-like factor 3

    See identical proteins and their annotated locations for XP_009894862.1

    UniProtKB/TrEMBL
    A0A093G5J3
    Related
    ENSPPUP00010016058.1, ENSPPUT00010026678.1
    Conserved Domains (4) summary
    COG5048
    Location:217 → 335
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:265 → 287
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:263 → 287
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:309 → 334
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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