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RAPSN receptor associated protein of the synapse [ Charadrius vociferus (killdeer) ]

Gene ID: 104295844, updated on 12-Mar-2024

Summary

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Gene symbol
RAPSN
Gene description
receptor associated protein of the synapse
Locus tag
N301_00966
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009647046.1 (2513301..2522291)

NW_009647046.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase mitochondrial 1 Neighboring gene CUGBP Elav-like family member 1 Neighboring gene transmembrane protein 178B-like Neighboring gene proteasome 26S subunit, ATPase 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009647046.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-membrane adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
43 kDa receptor-associated protein of the synapse

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009647046.1 Reference ASM70802v2

    Range
    2513301..2522291
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009895640.1 → XP_009893942.1  43 kDa receptor-associated protein of the synapse

    UniProtKB/TrEMBL
    A0A0A0A509
    Conserved Domains (5) summary
    COG0457
    Location:17 → 247
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:135 → 159
    TPR; TPR repeat [structural motif]
    pfam13424
    Location:212 → 286
    TPR_12; Tetratricopeptide repeat
    cl14649
    Location:152 → 244
    BRO1_Alix_like; Protein-interacting Bro1-like domain of mammalian Alix and related domains
    cl24038
    Location:9 → 88
    SNAP; Soluble N-ethylmaleimide-sensitive factor (NSF) Attachment Protein family
Nucleotide Protein
Heading Accession and Version

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