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CFAP20 cilia and flagella associated protein 20 [ Charadrius vociferus (killdeer) ]

Gene ID: 104294850, updated on 12-Mar-2024

Summary

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Gene symbol
CFAP20
Gene description
cilia and flagella associated protein 20
Locus tag
N301_13816
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646926.1 (907122..914065, complement)

NW_009646926.1Genomic Context describing neighboring genes Neighboring gene U6 snRNA biogenesis phosphodiesterase 1 Neighboring gene matrix metallopeptidase 15 Neighboring gene casein kinase 2 alpha 2 Neighboring gene cilia and flagella associated protein 263

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646926.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cilium beat frequency involved in ciliary motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in motile cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UPF0468 protein C16orf80 homolog
Names
UPF0468 protein C16orf80

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646926.1 Reference ASM70802v2

    Range
    907122..914065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009894508.1 → XP_009892810.1  UPF0468 protein C16orf80 homolog

    UniProtKB/TrEMBL
    A0A0A0A2D9
    Conserved Domains (1) summary
    pfam05018
    Location:22 → 179
    DUF667; Protein of unknown function (DUF667)
Nucleotide Protein
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