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CDH23 cadherin related 23 [ Charadrius vociferus (killdeer) ]

Gene ID: 104294403, updated on 12-Mar-2024

Summary

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Gene symbol
CDH23
Gene description
cadherin related 23
Locus tag
N301_13537
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
69
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009646844.1 (322829..546562)

NW_009646844.1Genomic Context describing neighboring genes Neighboring gene unc-5 netrin receptor B Neighboring gene solute carrier family 29 member 3 Neighboring gene chromosome unknown open reading frame, human C10orf105 Neighboring gene proactivator polypeptide-like Neighboring gene V-set immunoregulatory receptor Neighboring gene proactivator polypeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009646844.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catenin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-23
Names
Cadherin-23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009646844.1 Reference ASM70802v2

    Range
    322829..546562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009894006.1 → XP_009892308.1  cadherin-23

    UniProtKB/TrEMBL
    A0A099ZY32
    Conserved Domains (1) summary
    cd11304
    Location:1589 → 1686
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
Heading Accession and Version

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