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EFCAB2 EF-hand calcium binding domain 2 [ Charadrius vociferus (killdeer) ]

Gene ID: 104294097, updated on 12-Mar-2024

Summary

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Gene symbol
EFCAB2
Gene description
EF-hand calcium binding domain 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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See EFCAB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009661370.1 (3482722..3509888)

NW_009661370.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase protein 20 homolog Neighboring gene heterogeneous nuclear ribonucleoprotein U Neighboring gene kinesin family member 26B Neighboring gene SET and MYND domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009661370.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EF-hand calcium-binding domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009661370.1 Reference ASM70802v2

    Range
    3482722..3509888
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009893662.1 → XP_009891964.1  EF-hand calcium-binding domain-containing protein 2

    Conserved Domains (3) summary
    cd00051
    Location:145 → 205
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:67 → 128
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:66 → 129
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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