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SPAG1 sperm associated antigen 1 [ Charadrius vociferus (killdeer) ]

Gene ID: 104292514, updated on 12-Mar-2024

Summary

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Gene symbol
SPAG1
Gene description
sperm associated antigen 1
Locus tag
N301_02598
Gene type
protein coding
RefSeq status
MODEL
Organism
Charadrius vociferus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Charadriiformes; Charadriidae; Charadrius
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current ASM70802v2 (GCF_000708025.1) Unplaced Scaffold NW_009650064.1 (3982298..4025308, complement)

NW_009650064.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 46 Neighboring gene ring finger protein 19A, RBR E3 ubiquitin protein ligase Neighboring gene RNA polymerase II, I and III subunit K Neighboring gene F-box protein 43

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009650064.1 Unplaced Scaffold Reference ASM70802v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heat shock protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein targeting to mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sperm-associated antigen 1
Names
Sperm-associated antigen 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Charadrius vociferus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70802v2

Genomic

  1. NW_009650064.1 Reference ASM70802v2

    Range
    3982298..4025308 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009891914.1 → XP_009890216.1  sperm-associated antigen 1

    UniProtKB/TrEMBL
    A0A0A0AZY4
    Conserved Domains (6) summary
    smart00028
    Location:505 → 533
    TPR; Tetratricopeptide repeats
    sd00006
    Location:645 → 672
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:712 → 744
    TPR_1; Tetratricopeptide repeat
    pfam13371
    Location:225 → 281
    TPR_9; Tetratricopeptide repeat
    pfam13414
    Location:645 → 708
    TPR_11; TPR repeat
    pfam13877
    Location:827 → 918
    RPAP3_C; Potential Monad-binding region of RPAP3
Nucleotide Protein
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